Publications

Accurate Detection of Tandem Repeats from Error-Prone Sequences with EquiRep [link]
Zhezheng Song^*, Tasfia Zahin^*, Xiang Li, Mingfu Shao
Research in Computational Molecular Biology (RECOMB 2025)

An alignment-free method for phylogeny estimation using maximum likelihood [link]
Tasfia Zahin^*, Md Hasin Abrar^*, Mizanur Rahman Jewel, Tahrina Tasnim, Md. Shamsuzzoha Bayzid, Atif Rahman
BMC Bioinformatics 2025

Accurate Assembly of Circular RNAs with TERRACE [link] [slide]
Tasfia Zahin, Qian Shi^*, Carl Zang^*, Mingfu Shao
Research in Computational Molecular Biology (RECOMB 2024), Genome Research 2024